Publicaciones (45) Publicaciones de Ildefonso Cases Díaz

2024

  1. Decoding functional proteome information in model organisms using protein language models

    NAR Genomics and Bioinformatics, Vol. 6, Núm. 3

  2. The cellular landscape of the endochondral bone during the transition to extrauterine life

    Immunology and Cell Biology, Vol. 102, Núm. 2, pp. 131-148

2023

  1. Expanded FLP toolbox for spatiotemporal protein degradation and transcriptomic profiling in Caenorhabditis elegans

    Genetics, Vol. 223, Núm. 1

  2. The little skate genome and the evolutionary emergence of wing-like fins

    Nature, Vol. 616, Núm. 7957, pp. 495-503

2022

  1. Gene Regulatory Networks of Epidermal and Neural Fate Choice in a Chordate

    Molecular biology and evolution, Vol. 39, Núm. 4

2021

  1. Human prefoldin modulates co-transcriptional pre-mRNA splicing

    Nucleic Acids Research, Vol. 49, Núm. 11, pp. 6267-6280

2017

  1. Novel miRNA-mRNA interactions conserved in essential cancer pathways

    Scientific Reports, Vol. 7

2016

  1. DDRprot: a database of DNA damage response-related proteins

    Database : the journal of biological databases and curation, Vol. 2016

  2. Gene Expression Profiling Supports the Neural Crest Origin of Adult Rodent Carotid Body Stem Cells and Identifies CD10 as a Marker for Mesectoderm-Committed Progenitors

    Stem Cells, Vol. 34, Núm. 6, pp. 1637-1650

  3. Notch-regulated MIR-223 targets the aryl hydrocarbon receptor pathway and increases cytokine production in macrophages from rheumatoid arthritis patients

    Scientific Reports, Vol. 6

2015

  1. Deconstruction of DNA methylation patterns during myogenesis reveals specific epigenetic events in the establishment of the skeletal muscle lineage

    Stem Cells, Vol. 33, Núm. 6, pp. 2025-2036

2014

  1. Emergence and evolutionary analysis of the human DDR network: Implications in comparative genomics and downstream analyses

    Molecular Biology and Evolution, Vol. 31, Núm. 4, pp. 940-961

  2. Molecular evolution of multiple-level control of heme biosynthesis pathway in animal Kingdom

    PLoS ONE, Vol. 9, Núm. 1

2013

  1. Serine/threonine kinases and E2-ubiquitin conjugating enzymes in Planctomycetes: Unexpected findings

    Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, Vol. 104, Núm. 4, pp. 509-520

2011

  1. Functional analysis of the integration host factor site of the σ 54Pu promoter of Pseudomonas putida by in vivo UV imprinting

    Molecular Microbiology, Vol. 82, Núm. 3, pp. 591-601

2010

  1. SIREs: Searching for iron-responsive elements

    Nucleic Acids Research, Vol. 38, Núm. SUPPL. 2

  2. Sensing Xenobiotic Compounds: Lessons from Bacteria that Face Pollutants in the Environment

    SENSORY MECHANISMS IN BACTERIA: MOLECULAR ASPECTS OF SIGNAL RECOGNITION (CAISTER ACADEMIC PRESS), pp. 81-105

2009

  1. Bionemo: Molecular information on biodegradation metabolism

    Nucleic Acids Research, Vol. 37, Núm. SUPPL. 1

  2. Systemic approaches to biodegradation

    FEMS Microbiology Reviews, Vol. 33, Núm. 1, pp. 98-108

2008

  1. Editorial

    Bioinformatics