José Luis
Gómez Skarmeta
Universitat Pompeu Fabra
Barcelona, EspañaPublicaciones en colaboración con investigadores/as de Universitat Pompeu Fabra (15)
2024
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An amphioxus neurula stage cell atlas supports a complex scenario for the emergence of vertebrate head mesoderm
Nature Communications, Vol. 15, Núm. 1
2022
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Gene Regulatory Networks of Epidermal and Neural Fate Choice in a Chordate
Molecular biology and evolution, Vol. 39, Núm. 4
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MacroH2As regulate enhancer-promoter contacts affecting enhancer activity and sensitivity to inflammatory cytokines
Cell Reports, Vol. 39, Núm. 12
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Parallel evolution of amphioxus and vertebrate small-scale gene duplications
Genome Biology, Vol. 23, Núm. 1
2021
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Conservative route to genome compaction in a miniature annelid
Nature Ecology and Evolution, Vol. 5, Núm. 2, pp. 231-242
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Epigenomic profiling of primate lymphoblastoid cell lines reveals the evolutionary patterns of epigenetic activities in gene regulatory architectures
Nature Communications, Vol. 12, Núm. 1
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Publisher Correction: Conservative route to genome compaction in a miniature annelid (Nature Ecology & Evolution, (2021), 5, 2, (231-242), 10.1038/s41559-020-01327-6)
Nature Ecology and Evolution
2020
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Ancient Genomic Regulatory Blocks Are a Source for Regulatory Gene Deserts in Vertebrates after Whole-Genome Duplications
Molecular biology and evolution, Vol. 37, Núm. 10, pp. 2857-2864
2018
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Amphioxus functional genomics and the origins of vertebrate gene regulation
Nature, Vol. 564, Núm. 7734, pp. 64-70
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Evolutionary emergence of the rac3b/rfng/sgca regulatory cluster refined mechanisms for hindbrain boundaries formation
Proceedings of the National Academy of Sciences of the United States of America, Vol. 115, Núm. 16, pp. E3731-E3740
2016
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The Dynamic Regulatory Genome of Capsaspora and the Origin of Animal Multicellularity
Cell, Vol. 165, Núm. 5, pp. 1224-1237
2013
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Early eèolution of the T-box transcription factor family
Proceedings of the National Academy of Sciences of the United States of America, Vol. 110, Núm. 40, pp. 16050-16055
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The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild
BMC Genomics, Vol. 14, Núm. 1
2011
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Genome-wide CTCF distribution in vertebrates defines equivalent sites that aid the identification of disease-associated genes
Nature Structural and Molecular Biology, Vol. 18, Núm. 6, pp. 708-714
2010
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Multiple enhancers located in a 1-Mb region upstream of POU3F4 promote expression during inner ear development and may be required for hearing
Human Genetics, Vol. 128, Núm. 4, pp. 411-419