Elisa
De La Calle Mustienes
Argitalpenak (37) Elisa De La Calle Mustienes argitalpenak
2023
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The little skate genome and the evolutionary emergence of wing-like fins
Nature, Vol. 616, Núm. 7957, pp. 495-503
2021
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CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression
Nature Communications, Vol. 12, Núm. 1
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The emergence of the brain non-CpG methylation system in vertebrates
Nature Ecology and Evolution, Vol. 5, Núm. 3, pp. 369-378
2018
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A conserved Shh cis-regulatory module highlights a common developmental origin of unpaired and paired fins
Nature Genetics, Vol. 50, Núm. 4, pp. 504-509
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Amphioxus functional genomics and the origins of vertebrate gene regulation
Nature, Vol. 564, Núm. 7734, pp. 64-70
2016
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A single three-dimensional chromatin compartment in amphioxus indicates a stepwise evolution of vertebrate Hox bimodal regulation
Nature Genetics, Vol. 48, Núm. 3, pp. 336-341
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Active DNA demethylation at enhancers during the vertebrate phylotypic period
Nature Genetics, Vol. 48, Núm. 4, pp. 417-426
2015
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Deep conservation of wrist and digit enhancers in fish
Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, Núm. 3, pp. 803-808
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Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders
Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, Núm. 24, pp. 7542-7547
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Genome-wide epigenetic cross-talk between DNA methylation and H3K27me3 in zebrafish embryos
Genomics Data, Vol. 6, pp. 7-9
2014
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A polymorphic enhancer near GREM1 influences bowel cancer risk through differential CDX2 and TCF7L2 binding
Cell Reports, Vol. 8, Núm. 4, pp. 983-990
2013
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The developmental epigenomics toolbox: ChIP-seq and MethylCap-seq profiling of early zebrafish embryos
Methods, Vol. 62, Núm. 3, pp. 207-215
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The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild
BMC Genomics, Vol. 14, Núm. 1
2012
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Dynamics of enhancer chromatin signatures mark the transition from pluripotency to cell specification during embryogenesis
Genome Research, Vol. 22, Núm. 10, pp. 2043-2053
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Extensive conservation of ancient microsynteny across metazoans due to cis-regulatory constraints
Genome Research, Vol. 22, Núm. 12, pp. 2356-2367
2011
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An evolutionarily conserved three-dimensional structure in the vertebrate Irx clusters facilitates enhancer sharing and coregulation
Nature Communications, Vol. 2, Núm. 1
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Erratum: Genome-wide CTCF distribution in vertebrates defines equivalent sites that aid the identification of disease-associated genes (Nature Structural and Molecular Biology (2011) 18 (708-714))
Nature Structural and Molecular Biology
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Erratum: Genome-wide CTCF distribution in vertebrates defines equivalent sites that aid the identification of disease-associated genes (Nature Structural and Molecular Biology (2011) 18 (708-714))
Nature Structural and Molecular Biology
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Erratum: Long-range gene regulation links genomic type 2 diabetes and obesity risk regions to HHEX, SOX4, and IRX3 (Proceedings of the National Academy of Sciences of the United States of America (2010) 107, 2, (775-780) DOI: 10.1073/pnas.0911591107)
Proceedings of the National Academy of Sciences of the United States of America
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Genome-wide CTCF distribution in vertebrates defines equivalent sites that aid the identification of disease-associated genes
Nature Structural and Molecular Biology, Vol. 18, Núm. 6, pp. 708-714