Silvia
Naranjo Durán
Investigadora en el periodo 2007-2016
Publicaciones en las que colabora con José Luis Gómez Skarmeta (19)
2024
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An amphioxus neurula stage cell atlas supports a complex scenario for the emergence of vertebrate head mesoderm
Nature Communications, Vol. 15, Núm. 1
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Comparative 3D genome analysis between neural retina and retinal pigment epithelium reveals differential cis-regulatory interactions at retinal disease loci
Genome Biology, Vol. 25, Núm. 1
2023
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The little skate genome and the evolutionary emergence of wing-like fins
Nature, Vol. 616, Núm. 7957, pp. 495-503
2022
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Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements
Nature Genetics, Vol. 54, Núm. 7, pp. 1037-1050
2021
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The Shh/Gli3 gene regulatory network precedes the origin of paired fins and reveals the deep homology between distal fins and digits
Proceedings of the National Academy of Sciences of the United States of America, Vol. 118, Núm. 46
2020
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Ancient Genomic Regulatory Blocks Are a Source for Regulatory Gene Deserts in Vertebrates after Whole-Genome Duplications
Molecular biology and evolution, Vol. 37, Núm. 10, pp. 2857-2864
2018
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A conserved Shh cis-regulatory module highlights a common developmental origin of unpaired and paired fins
Nature Genetics, Vol. 50, Núm. 4, pp. 504-509
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Amphioxus functional genomics and the origins of vertebrate gene regulation
Nature, Vol. 564, Núm. 7734, pp. 64-70
2017
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Regulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elements
Genome Biology, Vol. 18, Núm. 1
2015
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Analysis of opo cis-regulatory landscape uncovers Vsx2 requirement in early eye morphogenesis
Nature Communications, Vol. 6
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Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders
Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, Núm. 24, pp. 7542-7547
2014
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A mobile insulator system to detect and disrupt cis-regulatory landscapes in vertebrates
Genome Research, Vol. 24, Núm. 3, pp. 487-495
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Obesity-associated variants within FTO form long-range functional connections with IRX3
Nature, Vol. 507, Núm. 7492, pp. 371-375
2012
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The 14q22.2 colorectal cancer variant rs4444235 shows cis-acting regulation of BMP4
Oncogene, Vol. 31, Núm. 33, pp. 3777-3784
2010
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Allelic variation at the 8q23.3 colorectal cancer risk locus functions as a Cis-acting regulator of EIF3H
PLoS Genetics, Vol. 6, Núm. 9
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Characterization of new otic enhancers of the pou3f4 gene reveal distinct signaling pathway regulation and spatio-temporal patterns
PLoS ONE, Vol. 5, Núm. 12
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Multiple enhancers located in a 1-Mb region upstream of POU3F4 promote expression during inner ear development and may be required for hearing
Human Genetics, Vol. 128, Núm. 4, pp. 411-419
2009
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The colorectal cancer risk at 18q21 is caused by a novel variant altering SMAD7 expression
Genome Research, Vol. 19, Núm. 6, pp. 987-993
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Zebrafish Enhancer Detection (ZED) vector: A new tool to facilitate transgenesis and the functional analysis of cis-regulatory regions in zebrafish
Developmental Dynamics, Vol. 238, Núm. 9, pp. 2409-2417