Juan Jesus
Tena Aguilar
Investigador no período 2011-2015
Publicacións nas que colabora con José Luis Gómez Skarmeta (41)
2023
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The little skate genome and the evolutionary emergence of wing-like fins
Nature, Vol. 616, Núm. 7957, pp. 495-503
2022
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Duplications disrupt chromatin architecture and rewire GPR101-enhancer communication in X-linked acrogigantism
American Journal of Human Genetics, Vol. 109, Núm. 4, pp. 553-570
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Gain of gene regulatory network interconnectivity at the origin of vertebrates
Proceedings of the National Academy of Sciences of the United States of America, Vol. 119, Núm. 11
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Gene Regulatory Networks of Epidermal and Neural Fate Choice in a Chordate
Molecular biology and evolution, Vol. 39, Núm. 4
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Multi-omics approach dissects cis-regulatory mechanisms underlying North Carolina macular dystrophy, a retinal enhanceropathy
American Journal of Human Genetics, Vol. 109, Núm. 11, pp. 2029-2048
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Multidimensional chromatin profiling of zebrafish pancreas to uncover and investigate disease-relevant enhancers
Nature Communications, Vol. 13, Núm. 1
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Parallel evolution of amphioxus and vertebrate small-scale gene duplications
Genome Biology, Vol. 23, Núm. 1
2021
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Asthma-associated genetic variants induce IL33 differential expression through an enhancer-blocking regulatory region
Nature Communications, Vol. 12, Núm. 1
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CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression
Nature Communications, Vol. 12, Núm. 1
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Straightforward protocol for allele-specific chromatin conformation capture
Gene, Vol. 767
2020
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Ancient Genomic Regulatory Blocks Are a Source for Regulatory Gene Deserts in Vertebrates after Whole-Genome Duplications
Molecular biology and evolution, Vol. 37, Núm. 10, pp. 2857-2864
2018
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4Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C data
PLoS Computational Biology, Vol. 14, Núm. 3
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Amphioxus functional genomics and the origins of vertebrate gene regulation
Nature, Vol. 564, Núm. 7734, pp. 64-70
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Characterization of the accessible genome in the human malaria parasite Plasmodium falciparum
Nucleic Acids Research, Vol. 46, Núm. 18, pp. 9414-9431
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Evolutionary emergence of the rac3b/rfng/sgca regulatory cluster refined mechanisms for hindbrain boundaries formation
Proceedings of the National Academy of Sciences of the United States of America, Vol. 115, Núm. 16, pp. E3731-E3740
2017
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CTCF counter-regulates cardiomyocyte development and maturation programs in the embryonic heart
PLoS Genetics, Vol. 13, Núm. 8
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Regulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elements
Genome Biology, Vol. 18, Núm. 1
2016
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A single three-dimensional chromatin compartment in amphioxus indicates a stepwise evolution of vertebrate Hox bimodal regulation
Nature Genetics, Vol. 48, Núm. 3, pp. 336-341
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Active DNA demethylation at enhancers during the vertebrate phylotypic period
Nature Genetics, Vol. 48, Núm. 4, pp. 417-426
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Assay for transposase-accessible chromatin and circularized chromosome conformation capture, two methods to explore the regulatory landscapes of genes in zebrafish
Methods in Cell Biology, Vol. 135, pp. 413-430