Publicaciones en las que colabora con Juan Jesus Tena Aguilar (11)

2022

  1. Parallel evolution of amphioxus and vertebrate small-scale gene duplications

    Genome Biology, Vol. 23, Núm. 1

2020

  1. Ancient Genomic Regulatory Blocks Are a Source for Regulatory Gene Deserts in Vertebrates after Whole-Genome Duplications

    Molecular biology and evolution, Vol. 37, Núm. 10, pp. 2857-2864

2018

  1. 4Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C data

    PLoS Computational Biology, Vol. 14, Núm. 3

  2. Amphioxus functional genomics and the origins of vertebrate gene regulation

    Nature, Vol. 564, Núm. 7734, pp. 64-70

  3. Evolutionary emergence of the rac3b/rfng/sgca regulatory cluster refined mechanisms for hindbrain boundaries formation

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 115, Núm. 16, pp. E3731-E3740

2016

  1. A single three-dimensional chromatin compartment in amphioxus indicates a stepwise evolution of vertebrate Hox bimodal regulation

    Nature Genetics, Vol. 48, Núm. 3, pp. 336-341

  2. Favorable genomic environments for cis-regulatory evolution: A novel theoretical framework

    Seminars in Cell and Developmental Biology, Vol. 57, pp. 2-10

2015

  1. Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, Núm. 24, pp. 7542-7547

2013

  1. Deep conservation of cis-regulatory elements in metazoans

    Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 368, Núm. 1632

2012

  1. An ancient genomic regulatory block conserved across bilaterians and its dismantling in tetrapods by retrogene replacement

    Genome Research, Vol. 22, Núm. 4, pp. 642-655

  2. Extensive conservation of ancient microsynteny across metazoans due to cis-regulatory constraints

    Genome Research, Vol. 22, Núm. 12, pp. 2356-2367