Publications dans lesquelles il/elle collabore avec José Luis Gómez Skarmeta (90)

2023

  1. The little skate genome and the evolutionary emergence of wing-like fins

    Nature, Vol. 616, Núm. 7957, pp. 495-503

2022

  1. Active DNA demethylation of developmental cis-regulatory regions predates vertebrate origins

    Science advances, Vol. 8, Núm. 48, pp. eabn2258

  2. Duplications disrupt chromatin architecture and rewire GPR101-enhancer communication in X-linked acrogigantism

    American Journal of Human Genetics, Vol. 109, Núm. 4, pp. 553-570

  3. Gain of gene regulatory network interconnectivity at the origin of vertebrates

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 119, Núm. 11

  4. Gene Regulatory Networks of Epidermal and Neural Fate Choice in a Chordate

    Molecular biology and evolution, Vol. 39, Núm. 4

  5. Multi-omics approach dissects cis-regulatory mechanisms underlying North Carolina macular dystrophy, a retinal enhanceropathy

    American Journal of Human Genetics, Vol. 109, Núm. 11, pp. 2029-2048

  6. Multidimensional chromatin profiling of zebrafish pancreas to uncover and investigate disease-relevant enhancers

    Nature Communications, Vol. 13, Núm. 1

  7. Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements

    Nature Genetics, Vol. 54, Núm. 7, pp. 1037-1050

  8. Parallel evolution of amphioxus and vertebrate small-scale gene duplications

    Genome Biology, Vol. 23, Núm. 1

  9. Regulatory Architecture of the RCA Gene Cluster Captures an Intragenic TAD Boundary, CTCF-Mediated Chromatin Looping and a Long-Range Intergenic Enhancer

    Frontiers in immunology, Vol. 13, pp. 901747

2021

  1. Asthma-associated genetic variants induce IL33 differential expression through an enhancer-blocking regulatory region

    Nature Communications, Vol. 12, Núm. 1

  2. CTCF knockout in zebrafish induces alterations in regulatory landscapes and developmental gene expression

    Nature Communications, Vol. 12, Núm. 1

  3. Straightforward protocol for allele-specific chromatin conformation capture

    Gene, Vol. 767

  4. The Shh/Gli3 gene regulatory network precedes the origin of paired fins and reveals the deep homology between distal fins and digits

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 118, Núm. 46

  5. The emergence of the brain non-CpG methylation system in vertebrates

    Nature Ecology and Evolution, Vol. 5, Núm. 3, pp. 369-378

2020

  1. Ancient Genomic Regulatory Blocks Are a Source for Regulatory Gene Deserts in Vertebrates after Whole-Genome Duplications

    Molecular biology and evolution, Vol. 37, Núm. 10, pp. 2857-2864

  2. Boundary sequences flanking the mouse tyrosinase locus ensure faithful pattern of gene expression

    Scientific Reports, Vol. 10, Núm. 1

2019

  1. Genetic regulation of amphioxus somitogenesis informs the evolution of the vertebrate head mesoderm

    Nature Ecology and Evolution, Vol. 3, Núm. 8, pp. 1233-1240

  2. Yap1b, a divergent Yap/Taz family member, cooperates with yap1 in survival and morphogenesis via common transcriptional targets

    Development (Cambridge), Vol. 146, Núm. 13

2018

  1. 4Cin: A computational pipeline for 3D genome modeling and virtual Hi-C analyses from 4C data

    PLoS Computational Biology, Vol. 14, Núm. 3